Skills for Kiro

PyTDC

k-dense-ai

Access and evaluate therapeutic datasets with PyTDC.

PyMC Bayesian Modeling

k-dense-ai

Efficient Bayesian modeling and inference with PyMC.

PyDESeq2

k-dense-ai

Perform differential gene expression analysis with ease.

Polars

k-dense-ai

High-performance DataFrame library for Python and Rust.

Pathway Enrichment

k-dense-ai

Analyze and interpret gene-set enrichment results.

Ontology Term Resolution

k-dense-ai

Accurately resolve and validate ontology terms.

OneKGPd

k-dense-ai

Query individual-level data from the 1000 Genomes Project.

Neuropixels Analysis

k-dense-ai

Comprehensive analysis for Neuropixels recordings.

Molecular Featurization Hub

k-dense-ai

Transform chemical structures into ML-ready features.

Matplotlib

k-dense-ai

Create highly customizable plots for scientific visualization.

Matchms

k-dense-ai

Process and compare tandem mass spectra efficiently.

LiteParse

k-dense-ai

Local parsing of documents with bounding box support.

LaminDB

k-dense-ai

Manage and track biological datasets with ease.

Imaging Data Commons

k-dense-ai

Access and download public cancer imaging datasets easily.

Histolab

k-dense-ai

Streamline whole slide image processing for pathology.

Genomic Coordinates

k-dense-ai

Convert and normalize genomic intervals with precision.

FlowIO

k-dense-ai

Efficiently read and write Flow Cytometry Standard files.

Exploratory Data Analysis

k-dense-ai

Perform thorough local analysis on scientific data files.

ETE Toolkit 4

k-dense-ai

Efficiently analyze and visualize phylogenetic trees.

deepTools

k-dense-ai

NGS analysis toolkit for high-throughput sequencing data.

Dask

k-dense-ai

Scale your data processing beyond memory limits.

BIDS Dataset Management

k-dense-ai

Streamline your neuroscience data organization and validation.

Arboreto

k-dense-ai

Infer gene regulatory networks from expression data efficiently.

AnnData

k-dense-ai

Efficiently manage annotated data matrices for single-cell analysis.